Insertion junction: CLIP2.053151_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.053151
Chromosome:chromosome 5
Location:1212083
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g241632 (1 of 41) PTHR32523//PTHR32523:SF8 - FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCGGTGCGATGCATCTTTACATGGGGTGTTTCCAGCTTTTGCGGAGTGC
Internal bar code:GGTTAGAGGTGCGGCGTGGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3525
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGATGAAGTCCAGGGCTT
Suggested primer 2:CGATGAGCAGCCCACCATTA