Insertion junction: CLIP2.053154_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.053154
Chromosome:chromosome 1
Location:5197149
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g036300 (1 of 13) PTHR13244//PTHR32523//PTHR32523:SF8 - ZINC FINGER MYND DOMAIN CONTAINING PROTEIN 10 // FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCTCAACGTGTTGACAGCGCAGCTGTCTACAGACGAGTGGTTTGCGCGG
Internal bar code:GACTGTAATGTGTATCATCGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2365
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:53
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:CGTCTGCCCTGTCAAGACTT
Suggested primer 2:GTTTGCGATGTCGTCTCTGC