Insertion junction: CLIP2.053157_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.053157
Chromosome:chromosome 17
Location:2615856
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g802051 (1 of 20) IPR010095//IPR013083 - Transposase IS605, OrfB, C-terminal // Zinc finger, RING/FYVE/PHD-type intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCTGTGTCTGAGCAGGTGTGTGCGAAGTGCGGACGGCGCCTGCTTGGTA
Internal bar code:GCTGGGGTTGTCGATGCCAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1857
LEAP-Seq percent confirming:16.6667
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GTTTGCCAAGCAGCATCTCC
Suggested primer 2:TGTTGCCCGTAACTAACCCC