Insertion junction: CLIP2.053157_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.053157
Chromosome:chromosome 17
Location:2615870
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g802051 (1 of 20) IPR010095//IPR013083 - Transposase IS605, OrfB, C-terminal // Zinc finger, RING/FYVE/PHD-type intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTAAGGTACGTGTGCATTGAGCGTTGTGCGCATTGCGTTGTGAAGATCA
Internal bar code:GCTGGGGTTGTCGATGCCAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3455
LEAP-Seq percent confirming:98.4615
LEAP-Seq n confirming:64
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:65

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTGCCCGTAACTAACCCC
Suggested primer 2:GTTTGCCAAGCAGCATCTCC