Insertion junction: CLIP2.053162_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.053162
Chromosome:chromosome 16
Location:1661253
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g654550 (1 of 5) 1.14.11.27 - [Histone H3]-lysine-36 demethylase / JmjC domain-containing histone demethylase 1A intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTAGGTTTATTCCCAGGGAGATCGGGCAGGACGGCCATACTCCCAAACAT
Internal bar code:ACATAACCCGGACGCTCTGAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1881
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:AAATGGGTGGCTACGACCTG
Suggested primer 2:TGGAAGACAGCTCCTTGCAG