Insertion junction: CLIP2.053177_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.053177
Chromosome:chromosome 9
Location:3940872
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g398252 (1 of 13) 1.1.1.300 - NADP-retinol dehydrogenase / Retinol dehydrogenase (NADP(+)) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTTGGGGCGGGCGGGGTTGTATGCATGTTGGGTGTGCATCGGAGTGCG
Internal bar code:ATATTTCCTTCGAGCGCGCGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:316
LEAP-Seq percent confirming:42.8571
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CGACGGTTTTCGGATGTGTG
Suggested primer 2:TCAACACACGCGAGGTAGAC