Insertion junction: CLIP2.053178_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.053178
Chromosome:chromosome 5
Location:564249
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g244550 (1 of 41) IPR000719//IPR011009 - Protein kinase domain // Protein kinase-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCGCTTCAGAGGTAATCCCCGCAATGCCCGCAGTGCTCTACACAACAG
Internal bar code:GATACCTAAGAGTGGGAGAGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:728
LEAP-Seq percent confirming:41.1765
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CGCGAAATTGCCATCACGAT
Suggested primer 2:CTTGTGGCACGGTTGATTGG