Insertion junction: CLIP2.053180_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.053180
Chromosome:chromosome 16
Location:129443
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g695300 (1 of 1) K12878 - THO complex subunit 1 (THOC1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCGCCGTAAACTCCTCCGTCGCTCCTGTGATTAAATCACTCCTTTCCC
Internal bar code:TCGGTAAAGCTATGGTGCCTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1765
LEAP-Seq percent confirming:62.5
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:AGCTCCAGCACCATTTCCTC
Suggested primer 2:AGACTAACAAGCGGGTTGGG