Insertion junction: CLIP2.053188_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.053188
Chromosome:chromosome 17
Location:4010994
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g728400 (1 of 2) PTHR19241:SF62 - PROTEIN SCARLET CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTTGGCAACCAGCTCCACAGCCAGGGTCAGCCGCTTGCGCGCCTCCGGC
Internal bar code:AGCGTGCGTAATATACTTCTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:491
LEAP-Seq percent confirming:5.88235
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:80
LEAP-Seq n unique pos:85

Suggested primers for confirmation by PCR

Suggested primer 1:TTCCGCGTGCTTAAGACACT
Suggested primer 2:CGTCCATGATCTCCCGACTG