Insertion junction: CLIP2.053189_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.053189
Chromosome:chromosome 2
Location:4266517
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g104700 (1 of 19) PTHR31251//PTHR31251:SF1 - FAMILY NOT NAMED // SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 10-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCGGGCAGCGCCGAACGAACTATTTGCAGCTGTTGGACTTGGTCGGGCC
Internal bar code:TGGTAACATGAATAGCCGCGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:461
LEAP-Seq percent confirming:16.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:ATCCAGGCAAGCCCACTTAC
Suggested primer 2:GCGTCGAAGGTGGGTTCTTA