Insertion junction: CLIP2.053196_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.053196
Chromosome:chromosome 10
Location:1010666
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g424850 SPL5,PRP31 (1 of 1) K12844 - U4/U6 small nuclear ribonucleoprotein PRP31 (PRPF31); Pre-mRNA-splicing factor intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTAGCCGCTAGGCGGCTAGCGAAGGCTACGGCTGGCCATCATACCAGC
Internal bar code:GTCTGTTACGGGGCCATCAGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1674
LEAP-Seq percent confirming:13.3333
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GTTTCCTATGCGCCGGGATA
Suggested primer 2:TCTGAAGACGAGGAGGGGAG