Insertion junction: CLIP2.053197_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.053197
Chromosome:chromosome 9
Location:3062989
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g393876 (1 of 3) 2.1.1.200 - tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase / TrMet(Xm32) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGAAGCCAACATCGGCGCTGTGGCTCGCGCCGCCGCCAACTTCGAGTGA
Internal bar code:GCGCGTAAGACTTTTTACTGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:926
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TCACAACCACAACCAGACCC
Suggested primer 2:GCAAGGCTGTTGTAACGCAA