Insertion junction: CLIP2.053202_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.053202
Chromosome:chromosome 14
Location:2410546
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00105622

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGAGATTCAAGGAAGCGCGACGCATTGAAAGTCCGCCAGGAAAAGCCTGT
Internal bar code:TGCCACATGCTAATTATTTTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:3757
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCTTCCTGTCCCGCATTC
Suggested primer 2:CTGAAGCAAATCGCCAGACG