Insertion junction: CLIP2.053219_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.053219
Chromosome:chromosome 9
Location:3566916
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre09.g396661 DUO3,DIV39 (1 of 2) IPR000104//IPR001005//IPR009057 - Antifreeze protein, type I // SANT/Myb domain // Homeodomain-like CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACATGGATGATGAGCCTCCTGCCGGCAAGGCCAACGCCACGGGCATGCCG
Internal bar code:CGTATGCGTTAAGAATATACAT

Confirmation - LEAP-Seq

LEAP-Seq distance:870
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:AGTTCGCTTCTGTCCACTGG
Suggested primer 2:CACCACGGATAGCGCATAGT