Insertion junction: CLIP2.053224_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.053224
Chromosome:chromosome 17
Location:721957
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g700750 GFY3 (1 of 5) PTHR30178 - INNER MEMBRANE PROTEIN YAAH; Putative acetate transporter CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCGTCCTTAATCGGGGCCATAGCCACGAGCTGGGCCTTGGTCTTGGCGC
Internal bar code:GAGGTTTGACCTTCTATCTTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2389
LEAP-Seq percent confirming:90.1408
LEAP-Seq n confirming:64
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:71

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCGTGTCCTTCTTCAGGG
Suggested primer 2:CAGTGTTGCAACGGTGTGAG