Insertion junction: CLIP2.053226_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.053226
Chromosome:chromosome 17
Location:1037061
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g703400 (1 of 3) PTHR11207//PTHR11207:SF7 - RIBONUCLEASE III // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGTGGGGCTGCGGCTGTGCTACTACGAGAGAGGTACGGTATGGCTTCA
Internal bar code:AGAGAGTCAAGTCCCCTCATGC

Confirmation - LEAP-Seq

LEAP-Seq distance:886
LEAP-Seq percent confirming:37.5
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCACCAGGTCACCAATCA
Suggested primer 2:CTCTAAATGCCCACTTGCGC