Insertion junction: CLIP2.053235_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.053235
Chromosome:chromosome 13
Location:837950
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g567250 (1 of 2) IPR007087//IPR015880 - Zinc finger, C2H2 // Zinc finger, C2H2-like intron
Cre13.g567300 (1 of 1) PTHR18968//PTHR18968:SF86 - THIAMINE PYROPHOSPHATE ENZYMES // SUBFAMILY NOT NAMED 3'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGTGTGTGCGCCATGCCCCTGAGAGCTAAAGCCCCAGGCCGGCCCAGG
Internal bar code:ATGATGAGGCGAACTCCTCAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:869
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GGCGTGTCGAATTCAAGCTC
Suggested primer 2:CACCACCACTCTCATGACCC