Insertion junction: CLIP2.053256_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.053256
Chromosome:chromosome 14
Location:3317715
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g629429 (1 of 41) PTHR32523//PTHR32523:SF8 - FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCCGCGCAGCAGGACCGCGGCTGTAGCACCAGCGTCAGCTTCCCCAGC
Internal bar code:GGATGCAGACTCAGAGAGATTT

Confirmation - LEAP-Seq

LEAP-Seq distance:520
LEAP-Seq percent confirming:42.8571
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCTCCCGTTACCTCTACA
Suggested primer 2:AGACAACTACATTGCCCCCG