Insertion junction: CLIP2.053257_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.053257
Chromosome:chromosome 8
Location:3358059
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g377600 ATG14 AuTophaGy related; (1 of 1) PF10186 - Vacuolar sorting 38 and autophagy-related subunit 14 (Atg14) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGCTTTACTCACTCAGTTCTCCACATGAACGGCTACCCCCCCCCTTCA
Internal bar code:TGCGACGGGCTATCTTATCAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:201
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CTTCAACTGCCAGCAACACC
Suggested primer 2:CAGCACGCAATCACACACAA