Insertion junction: CLIP2.053258_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.053258
Chromosome:chromosome 1
Location:4923872
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00004889

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAAAACTTGCGAGGCCATGAAGTTCCCAGCCCGGCTTTTGATATGTCA
Internal bar code:GAGATTTATTTTACTGAGAACC

Confirmation - LEAP-Seq

LEAP-Seq distance:2300
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:74
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:74

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTGGAAAGAACGCGTATG
Suggested primer 2:ACACCTGAGAGCGGGATTTG