Insertion junction: CLIP2.053264_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.053264
Chromosome:chromosome 16
Location:6125611
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g677200 (1 of 274) IPR020683 - Ankyrin repeat-containing domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCACGGTCGCCGATCTTTGGGTGGCCGGATGCGGCGCTCTTGTGGCTG
Internal bar code:CGTCATCAGAGTCCTACGCCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:4420
LEAP-Seq percent confirming:94.2857
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:CAGTTCATGTGGCTGCATCG
Suggested primer 2:GTGTCCTGCTGAAGACGTCA