Insertion junction: CLIP2.053292_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.053292
Chromosome:chromosome 3
Location:8801666
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g206817 (1 of 2) IPR001739//IPR016177 - Methyl-CpG DNA binding // DNA-binding domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGTGCAGGCGCCTATAATACTCAGGCAACAGGCGCCTGGCGCGGGCCAG
Internal bar code:TCTCACCAGTCATTTATGACCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1920
LEAP-Seq percent confirming:57.1429
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GCCACCCTTTCATCACTCCA
Suggested primer 2:TGCTGCAGCTGTTAGACACA