Insertion junction: CLIP2.053294_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.053294
Chromosome:chromosome 17
Location:1682464
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g802043 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGAGGGGTTTTGGGCCACGGTTAAGGTGCGTCTGGGTTCGGCAAGGGCT
Internal bar code:AAAAAGGATAGGCGTTATAGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3453
LEAP-Seq percent confirming:7.40741
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:25
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGCTACAGCCGACTCCTA
Suggested primer 2:TTTGCTGACGTGTAGCGACT