Insertion junction: CLIP2.053305_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.053305
Chromosome:chromosome 4
Location:3696653
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g229050 (1 of 726) IPR011009 - Protein kinase-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTGCGATGCCGCTGCAAGTGCTTGAAGTCCATGCGTGACCATGTGGGA
Internal bar code:GACCGCTTGCCATTCGAGGTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1834
LEAP-Seq percent confirming:31.0345
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:GAGATGGGCATTCGAGGAGG
Suggested primer 2:CCACCTGATGTCATGCCCTT