Insertion junction: CLIP2.053314_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.053314
Chromosome:chromosome 5
Location:2396844
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g238400 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGATGTCCGGCACGCTGCTGCCCAACACACTGCATGTCGCCCACACGT
Internal bar code:ACCGTGGATCGGGGCCGATTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:4067
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:GGATGTCCTTGAGGTGCACA
Suggested primer 2:AGCTAAGCTTGGGGCAGAAG