Insertion junction: CLIP2.053314_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.053314
Chromosome:chromosome 5
Location:2396851
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g238400 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCACCCGTCACAGGAGCCGACGCAAAGCTCTCCATTACAATATAAGTTC
Internal bar code:TGTGCCTCAATTCGGGCTCCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:812
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:AGCTAAGCTTGGGGCAGAAG
Suggested primer 2:GGATGTCCTTGAGGTGCACA