Insertion junction: CLIP2.053321_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.053321
Chromosome:chromosome 1
Location:338140
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g001950 Predicted protein with 3-phosphoshikimate1-carboxyvinyltransferase core domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGAGCCGGACACAGAGCCCGCGCTGCTGCCCACGGCCCCTGGCCCGCCG
Internal bar code:ACAATGTGGCCTGTTTTGGCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:931
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:AGCCTCTCACAAGACACGTG
Suggested primer 2:TGTTACGAACAGTCCACGGG