Insertion junction: CLIP2.053323_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.053323
Chromosome:chromosome 9
Location:4608093
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g401589 (1 of 2) IPR000104//IPR002893//IPR003072 - Antifreeze protein, type I // Zinc finger, MYND-type // Orphan nuclear receptor, NOR1 type CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCCCCTGGCGGCTGGCGCGCCGCAACCGTCAGCACGGGCCAGCAGTTA
Internal bar code:ACGTGTACTTAAGGGGGCTGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2729
LEAP-Seq percent confirming:94.5946
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:CGTCTCCCTGGTATGGCATC
Suggested primer 2:CTTGTGCCCTTGTGGAAACG