Insertion junction: CLIP2.053330_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.053330
Chromosome:chromosome 2
Location:821057
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g078700 (1 of 1) PTHR10694//PTHR10694:SF7 - JUMONJI DOMAIN CONTAINING PROTEIN // LYSINE-SPECIFIC DEMETHYLASE 4A-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCGGCCCAGGCGACATTCCGCCGTCCTCTGAGGTCACGGCGCCGAGCGA
Internal bar code:AAGTTAATCTTAAAGGCCGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3597
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:53
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGTACCCCCTGCCCAAC
Suggested primer 2:AGTCGTGGCCAGCATATAGC