Insertion junction: CLIP2.053332_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.053332
Chromosome:chromosome 12
Location:4291978
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g518550 FAP54,C1d-HC1 Flagellar central pair-associated protein 54; (1 of 1) PF14858 - Domain of unknown function (DUF4486) (DUF4486) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTGCGGGTGCAGGTCTGGGCGAGGAGGAGCGGCCGGTGACGGCGCGCGT
Internal bar code:GCCCACAGCTTCAGGAGCTTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:950
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CATGATGCGCTCGTTGAAGG
Suggested primer 2:AGGGATGTGTCAGGCTTGTG