Insertion junction: CLIP2.053332_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.053332
Chromosome:chromosome 12
Location:4291982
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g518550 FAP54,C1d-HC1 Flagellar central pair-associated protein 54; (1 of 1) PF14858 - Domain of unknown function (DUF4486) (DUF4486) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCGACGCCGCCAGGGCGGCGCGACGAGGCGGCGGGCCGTCGAAGCGGTG
Internal bar code:GCCCACAGCTTCAGGAGCTTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:3112
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:AGGGATGTGTCAGGCTTGTG
Suggested primer 2:CATGATGCGCTCGTTGAAGG