Insertion junction: CLIP2.053336_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.053336
Chromosome:chromosome 3
Location:8072372
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g201301 (1 of 2) IPR000104//IPR000945//IPR020683 - Antifreeze protein, type I // Dopamine beta-hydroxylase-related // Ankyrin repeat-containing domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGACCGCGGGTGGTGCTGCGGCTGCGCCAGCTGCGTTGGCGGTGGCTGG
Internal bar code:TCTGAGGCAGGAGCATGGGATT

Confirmation - LEAP-Seq

LEAP-Seq distance:885
LEAP-Seq percent confirming:56.25
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:TCCCACGGACACATCCATTG
Suggested primer 2:TTGTGTGCAGGTGTGTGAGT