Insertion junction: CLIP2.053342_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.053342
Chromosome:chromosome 9
Location:5467937
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g408750 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTCAGGTGTGTGTGAATGTGTGTGTGTGGGGGGGGGGAGATTATGAGG
Internal bar code:GTAGAGACTCGACGGGAAGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1911
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:TCCGCTAGCCCTTTTGACTG
Suggested primer 2:GAAGGCTACGAGACGAGAGC