Insertion junction: CLIP2.053342_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.053342
Chromosome:chromosome 16
Location:7262284
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g677765 (1 of 4) PF00207 - Alpha-2-macroglobulin family (A2M) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGGCGAATTATTTTCTCAGTACCCGAATGGGTACTAGTGCCCGGTTTT
Internal bar code:TGTGTAACTGCTCGGCGTATGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2147
LEAP-Seq percent confirming:47.0588
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CTCGCCCACATTTGCATAGC
Suggested primer 2:ATGAAGTGAAGTGCCGACGT