Insertion junction: CLIP2.053348_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.053348
Chromosome:chromosome 16
Location:6774176
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g672400 (1 of 2) IPR009057//IPR017877 - Homeodomain-like // Myb-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGTTCTGCTGCACCATGGCCCATTACCTTTGTCGCGCAGGCAGTGCGGC
Internal bar code:TATAAGCCTGGCGTGGTCACTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2459
LEAP-Seq percent confirming:90.4762
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GTCGTCACCTTCCTGCTCTC
Suggested primer 2:AGAGCCTGCAATCCTATCGC