Insertion junction: CLIP2.053356_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.053356
Chromosome:chromosome 4
Location:2782923
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g223750 (1 of 1) IPR000048//IPR009071//IPR027417 - IQ motif, EF-hand binding site // High mobility group box domain // P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGAGCGCCCTGTCCAGCGATGCGCCACCCCCTGCTTGCTGTGCTGCGAT
Internal bar code:TCTCTGGTCTGGAGAAAGTGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2261
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CAAACCGCCACACTCACTTG
Suggested primer 2:GAGTTCCTCGGCACAACTCA