Insertion junction: CLIP2.053364_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.053364
Chromosome:chromosome 3
Location:675685
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g145767 RRP6,RRP6a putative exosome subunit; (1 of 1) K12951 - cation-transporting P-type ATPase D (ctpD) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGACCCTCGACACCGACATGGCGGGAGCGGCCTCGCCGAAGGTGTTGT
Internal bar code:ATCTGCGGCGGTCGGGAATTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:647
LEAP-Seq percent confirming:91.3043
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:TACACCACTTGGAAGCCGTC
Suggested primer 2:CGGCTACACAAACAAGCACC