Insertion junction: CLIP2.053365_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.053365
Chromosome:chromosome 3
Location:533427
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g145147 TRP8 Transient receptor potential ion channel protein; (1 of 6) PTHR31942//PTHR31942:SF1 - FAMILY NOT NAMED // MLO-LIKE PROTEIN 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATGCTGGAAACCCCATCCATCCCCATCCCCACCAATCCATGCCACTGC
Internal bar code:CAAGCCTGCTGACTAGTCTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1922
LEAP-Seq percent confirming:77.1429
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTGCTGCGTTGACTTTCA
Suggested primer 2:CATCATCGTGCTGCACTTCG