Insertion junction: CLIP2.053375_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.053375
Chromosome:chromosome 17
Location:1211288
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g802036 (1 of 2) IPR002048//IPR003117 - EF-hand domain // cAMP-dependent protein kinase regulatory subunit, dimerization-anchoring domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGCCGTGAGTGCGGAGTGAAGGCACGCGCCAGCAGGCTGCTCGACCAG
Internal bar code:GCGCAGAACTAAATCTAGTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1759
LEAP-Seq percent confirming:97.1429
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:TAACACCTGCAGCAAAACGC
Suggested primer 2:TTGCAAACTTAGCCACGCAC