Insertion junction: CLIP2.053376_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.053376
Chromosome:chromosome 2
Location:1157443
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g081150 TET3 (1 of 12) PF12851 - Oxygenase domain of the 2OGFeDO superfamily (Tet_JBP); non-canonical TET-dioxygenase, putative 5-methylcytosine-modifying enzyme intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGGCCGGCCTGCTCGGGGTCTCCATCGCCGCGCCATGCTGCACGCACGC
Internal bar code:CTAACCCTTGGCATGCATAACT

Confirmation - LEAP-Seq

LEAP-Seq distance:2787
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGGTGTCCAAGAAGCAGT
Suggested primer 2:CCTGGTAGCGAAGGAAGTGG