Insertion junction: CLIP2.053382_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.053382
Chromosome:chromosome 12
Location:7737608
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g554650 REC8 cohesin complex subunit, putative meiotic isoform; (1 of 3) PF04824 - Conserved region of Rad21 / Rec8 like protein (Rad21_Rec8) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTCCTCGTCGTCAACGCCCGCAGCGCCGCCAGCAGCAGCAGCGCCGCCA
Internal bar code:CGACGCAGTCGCAACCGGCATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1486
LEAP-Seq percent confirming:27.2727
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:TAGATGGGAGGGGATTGCCA
Suggested primer 2:AACTTGATACCGCACCCCAG