Insertion junction: CLIP2.053384_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.053384
Chromosome:chromosome 2
Location:7744687
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g146700 (1 of 1) PF06747 - CHCH domain (CHCH) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGAAGCGAGGGCACACGGTTGGCCGGCATCTCCCATGCAAAGGCCGGG
Internal bar code:ACGGCGCGGAGACTGACAACTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3410
LEAP-Seq percent confirming:85.2941
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTCGCCGTTGTACTTGGT
Suggested primer 2:CTCAGTGCTCCACGAGTGTT