Insertion junction: CLIP2.053390_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.053390
Chromosome:chromosome 1
Location:3035260
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g019200 NOP52,GEX18 RRP1-like protein; (1 of 1) K14849 - ribosomal RNA-processing protein 1 (RRP1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTAGCAAGCAGTTAAGGAGGCTTGTAAGTAGCACCTGTACGGCGAAGGA
Internal bar code:GGGTTCAGGTGTTCGGCAAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1501
LEAP-Seq percent confirming:10.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:AGAAAGCACCTAAGCCGGTC
Suggested primer 2:CCTCAACCTCATCCTGGCAG