Insertion junction: CLIP2.053393_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.053393
Chromosome:chromosome 12
Location:8449076
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g549950 (1 of 1) IPR007305//IPR011691//IPR020846 - Vesicle transport protein, Got1/SFT2-like // Vesicle transport protein, SFT2-like // Major facilitator superfamily domain; SFT2-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACGCTGCCAGCTGGCTGCCACATGTGTGCTCCAGGCCAGCGCAGCCCCC
Internal bar code:AGCTAGGGAGTGTCTGCTGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:471
LEAP-Seq percent confirming:22.2222
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TGATGGAGGAGAAGCGCATC
Suggested primer 2:GCGAGTTAAATCCGTGCGAC