Insertion junction: CLIP2.053398_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.053398
Chromosome:chromosome 6
Location:791822
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g255050 (1 of 1) PTHR24188:SF44 - E3 UBIQUITIN-PROTEIN LIGASE XBAT35-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACACAGGTCACGCCACGTCAGCCCCCAAACCCGCCCCTGGCGGCCCGG
Internal bar code:TCTTCACGAATCGGCAGCAGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1118
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TCGTAGCTCTTCATCCCCCA
Suggested primer 2:TAGTAGTAGGAGCCGGTGGG