Insertion junction: CLIP2.053402_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.053402
Chromosome:chromosome 17
Location:1165381
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g704300 FAP47 Flagellar Associated Protein 47; (1 of 1) PTHR23053//PTHR23053:SF2 - DLEC1 DELETED IN LUNG AND ESOPHAGEAL CANCER 1 // PRIMARY CILIARY DYSKINESIA PROTEIN 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTCTTGCCCAGCATTGCTTGCCCTCCTCACCCGGCCGTTCTTCTTCTG
Internal bar code:TCGGGTTTTGATTGTGGTAGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:4024
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:AGCTGCCAGAGGATTTCACC
Suggested primer 2:CCAACCATAAGCGCCGAAAG