Insertion junction: CLIP2.053404_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.053404
Chromosome:chromosome 1
Location:4584178
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g031600 (1 of 2) PF05915 - Eukaryotic protein of unknown function (DUF872) (DUF872) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAGCGTCGTCGGGGTCGAGGCGATAGGGATTCTTCATTCCTTTGCTTCG
Internal bar code:TCGTCTCACGACTTAACGACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:531
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TACCAACGACTATGAGCCGC
Suggested primer 2:GATCCCAGGATGATGAGCGG