Insertion junction: CLIP2.053405_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.053405
Chromosome:chromosome 11
Location:3291454
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g476400 MAG1 DNA-3-methyladenine glycosylase II; (1 of 1) 3.2.2.21 - DNA-3-methyladenine glycosylase II / DNA-3-methyladenine glycosidase II CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGACACACTGCGCAGAGCCGGGGACGGGGCTGTAGCAGCCGCCGCCGCCA
Internal bar code:GTACTTTGCTTTTCTAATTTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:111
LEAP-Seq percent confirming:3.84615
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:25
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCCAGGACTATGCTAGAG
Suggested primer 2:ACTGCTGCTGCTATTGTGGT