Insertion junction: CLIP2.053411_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.053411
Chromosome:chromosome 12
Location:3155940
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g500450 TPD1 (1 of 2) PTHR12121:SF37 - 2',5'-PHOSPHODIESTERASE 12; 2'%252C5'-phosphodiesterase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTCTGCTGATGAAGCAGCTAATCTCCTGAACCCGAAAACCCTAGAGTTG
Internal bar code:TATATCGTTGGCTTGTCCCATA

Confirmation - LEAP-Seq

LEAP-Seq distance:1623
LEAP-Seq percent confirming:47.3684
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGTAGAACACGTCCACCA
Suggested primer 2:TGGGCTCAGGAAATGCAGAG