Insertion junction: CLIP2.053419_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.053419
Chromosome:chromosome 3
Location:3127084
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g164600 PMA3,PMH1,ACA3 (1 of 3) K01535 - H+-transporting ATPase (E3.6.3.6); P-type ATPase/cation transporter, plasma membrane intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTAGCGATCTCTCCGAGCACATCAGGACCACAAAGCCTAGCAATCTAA
Internal bar code:GGGAGTAGACAGAGTGCGTGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2411
LEAP-Seq percent confirming:59.2308
LEAP-Seq n confirming:77
LEAP-Seq n nonconfirming:53
LEAP-Seq n unique pos:130

Suggested primers for confirmation by PCR

Suggested primer 1:CGGGTTAAAATGGCTCGCTG
Suggested primer 2:CCCATATCGGCCCAGTTCTC